European Centre for Disease Prevention and Control (ECDC)
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EpiSignalDetection
EpiSignalDetection PublicECDC in collaboration with Epiconcept developed an R package for monitoring infectious disease surveillance data
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EcdcColors
EcdcColors PublicDevelopment of an R package for using colour palettes following March 2018 ECDC guidelines for presentation of surveillance data
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EcdcSupportSnippets
EcdcSupportSnippets PublicDevelopment of various support R code snippets and packages for use for analysis and modelling purposes.
Repositories
- ecdc_nube Public
NUBE is an Ultrafast Bioinformatics calculation Engine. It is the ECDC genomic analysis calculation system.
- ECDC-Mathematical-Models Public
- ecdc-habsi-surveillance Public
- Medical-Redactor Public
Medical Redactor is an advanced, privacy-first, and fully portable Python application designed for healthcare professionals. It automates the ingestion, structural analysis, and text redaction of sensitive patient data (PHI/PII) from clinical records and laboratory data, allowing for seamless anonymization and data sharing.
- COVID19SocialPatterns Public
- EHR-BSI Public
- epc_cli Public
Command-line interface for automating and managing epidemiological and WGS data submissions to the EpiPulse Cases platform, with support for configuration, validation, and approval workflows.
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