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@HolobiomicsLab

HolobiomicsLab

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  1. MetaboT MetaboT Public

    🤖 MetaboT 🍵 is an AI system that accelerates mass spectrometry-(MS) based metabolomics knowledge graph mining

    Jupyter Notebook 34 2

  2. Mimosa-AI Mimosa-AI Public

    Self-evolving AI-Framework for Autonomous Scientific Research (ASR) that writes, runs, and improves its own multi-agent workflows. Powered by MCP tool discovery and Darwinian evolution.

    Python 28 8

  3. Perspicacite-AI Perspicacite-AI Public

    An agentic AI assistant designed for scientists, researchers, and students who want to find and understand academic literature without getting lost in hundreds of papers

    Python 21 7

  4. asb-skill-collections asb-skill-collections Public

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

    Python 15

  5. Toolomics Toolomics Public

    A suite of tools from the Holobiomics Lab for Agents, organized as a set of MCP servers.

    Python 4 1

  6. awesome-metabolomics-CompMS awesome-metabolomics-CompMS Public

    A community-maintained list of softwares and ressources about computational mass spectrometry-based metabolomics

    2

Repositories

Showing 10 of 15 repositories
  • Mimosa-AI Public

    Self-evolving AI-Framework for Autonomous Scientific Research (ASR) that writes, runs, and improves its own multi-agent workflows. Powered by MCP tool discovery and Darwinian evolution.

    HolobiomicsLab/Mimosa-AI's past year of commit activity
    Python 28 Apache-2.0 8 27 14 Updated Sep 18, 2026
  • asb-skill-collections Public

    Curated, evidence-grounded skill and software-tool collections for scientific AI agents, generated by the AgenticScienceBuilder

    HolobiomicsLab/asb-skill-collections's past year of commit activity
    Python 15 Apache-2.0 0 15 0 Updated Sep 17, 2026
  • Magnolia-AI Public
    HolobiomicsLab/Magnolia-AI's past year of commit activity
    Python 0 0 1 0 Updated Sep 16, 2026
  • Perspicacite-AI Public

    An agentic AI assistant designed for scientists, researchers, and students who want to find and understand academic literature without getting lost in hundreds of papers

    HolobiomicsLab/Perspicacite-AI's past year of commit activity
    Python 21 Apache-2.0 7 2 1 Updated Sep 13, 2026
  • MetaBoKG Public
    HolobiomicsLab/MetaBoKG's past year of commit activity
    Python 0 0 0 0 Updated Aug 24, 2026
  • hpc-session Public

    One authenticated SSH window to a SLURM cluster: optional VPN, optional TOTP 2FA, connection multiplexing, and job submit/watch/fetch — usable from shells with no terminal.

    HolobiomicsLab/hpc-session's past year of commit activity
    Shell 0 MIT 0 1 1 Updated Aug 21, 2026
  • Toolomics Public

    A suite of tools from the Holobiomics Lab for Agents, organized as a set of MCP servers.

    HolobiomicsLab/Toolomics's past year of commit activity
    Python 4 Apache-2.0 1 0 0 Updated Aug 12, 2026
  • HolobiomicsLabLogosAndGraphics Public

    Collection of logos, graphical elements, and branding assets for the HolobiomicsLab

    HolobiomicsLab/HolobiomicsLabLogosAndGraphics's past year of commit activity
    1 LGPL-3.0 0 0 0 Updated Jun 22, 2026
  • MEMORIES Public
    HolobiomicsLab/MEMORIES's past year of commit activity
    Python 0 1 0 0 Updated May 28, 2026
  • MetaboT Public

    🤖 MetaboT 🍵 is an AI system that accelerates mass spectrometry-(MS) based metabolomics knowledge graph mining

    HolobiomicsLab/MetaboT's past year of commit activity
    Jupyter Notebook 34 Apache-2.0 2 0 1 Updated May 7, 2026
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