rloadest won't fully install on mac

Hi there, I've been trying to install rloadest on my computer and I'm not having a lot of luck. I keep getting this error message related to smwrStats (pasted below). I have updated my R and Rstudio which didn't help. Any suggestions is greatly appreciated!

Warning message:
In i.p(...) :
installation of package ‘/var/folders/dn/132b2sc97dv09dhw6_d4_4f00000gn/T//RtmpfyunLS/file8fc2770abeae/smwrStats_0.7.6.tar.gz’ had non-zero exit status

The first thing I would try is to choose "None" on any updates:

remotes::install_github("USGS-R/smwrStats", force = TRUE)
Downloading GitHub repo USGS-R/smwrStats@HEAD
These packages have more recent versions available.
It is recommended to update all of them.
Which would you like to update?

1: All                                           
2: CRAN packages only                            
3: None                                          
4: pillar       (1.5.1      -> 1.6.0     ) [CRAN]
5: RcppArmad... (0.10.2.2.0 -> 0.10.4.0.0) [CRAN]
6: knitr        (1.31       -> 1.32      ) [CRAN]

Enter one or more numbers, or an empty line to skip updates: 3
√  checking for file 'C:\Users\ldecicco\AppData\Local\Temp\1\Rtmp8YO27G\remotese383e9a3ab9\USGS-R-smwrStats-2e02eb7/DESCRIPTION' (495ms)
-  preparing 'smwrStats': (1.3s)
√  checking DESCRIPTION meta-information ...

If that doesn't work, could you paste in what you get when you run:

devtools::session_info()

Ok I tried choosing "none" on updates and that didn't work. This is what came up after running:

devtools::session_info()
─ Session info ──────────────────────────────────────────────────────────────────────────────────────────────────
setting value
version R version 4.0.5 (2021-03-31)
os macOS High Sierra 10.13.6
system x86_64, darwin17.0
ui RStudio
language (EN)
collate en_CA.UTF-8
ctype en_CA.UTF-8
tz America/Toronto
date 2021-04-14

─ Packages ──────────────────────────────────────────────────────────────────────────────────────────────────────
package * version date lib source
abind 1.4-5 2016-07-21 [1] CRAN (R 4.0.2)
akima 0.6-2.1 2020-05-30 [1] CRAN (R 4.0.2)
cachem 1.0.4 2021-02-13 [1] CRAN (R 4.0.2)
callr 3.6.0 2021-03-28 [1] CRAN (R 4.0.2)
car 3.0-10 2020-09-29 [1] CRAN (R 4.0.2)
carData 3.0-4 2020-05-22 [1] CRAN (R 4.0.2)
cellranger 1.1.0 2016-07-27 [1] CRAN (R 4.0.2)
cli 2.4.0 2021-04-05 [1] CRAN (R 4.0.2)
colorspace 2.0-0 2020-11-11 [1] CRAN (R 4.0.2)
crayon 1.4.1 2021-02-08 [1] CRAN (R 4.0.2)
curl 4.3 2019-12-02 [1] CRAN (R 4.0.1)
data.table 1.14.0 2021-02-21 [1] CRAN (R 4.0.2)
dataRetrieval * 2.7.7 2021-03-06 [1] CRAN (R 4.0.2)
desc 1.3.0 2021-03-05 [1] CRAN (R 4.0.2)
devtools 2.4.0 2021-04-07 [1] CRAN (R 4.0.2)
digest 0.6.27 2020-10-24 [1] CRAN (R 4.0.2)
dplyr * 1.0.5 2021-03-05 [1] CRAN (R 4.0.2)
ellipsis 0.3.1 2020-05-15 [1] CRAN (R 4.0.2)
fansi 0.4.2 2021-01-15 [1] CRAN (R 4.0.2)
farver 2.1.0 2021-02-28 [1] CRAN (R 4.0.2)
fastmap 1.1.0 2021-01-25 [1] CRAN (R 4.0.2)
forcats 0.5.1 2021-01-27 [1] CRAN (R 4.0.2)
forecast 8.14 2021-03-11 [1] CRAN (R 4.0.2)
foreign 0.8-81 2020-12-22 [1] CRAN (R 4.0.5)
fracdiff 1.5-1 2020-01-24 [1] CRAN (R 4.0.2)
fs 1.5.0 2020-07-31 [1] CRAN (R 4.0.2)
generics 0.1.0 2020-10-31 [1] CRAN (R 4.0.2)
ggplot2 * 3.3.3 2020-12-30 [1] CRAN (R 4.0.2)
ggtext 0.1.1 2020-12-17 [1] CRAN (R 4.0.2)
glue 1.4.2 2020-08-27 [1] CRAN (R 4.0.2)
gridtext 0.1.4 2020-12-10 [1] CRAN (R 4.0.2)
gtable 0.3.0 2019-03-25 [1] CRAN (R 4.0.2)
haven 2.3.1 2020-06-01 [1] CRAN (R 4.0.2)
hms 1.0.0 2021-01-13 [1] CRAN (R 4.0.2)
httr 1.4.2 2020-07-20 [1] CRAN (R 4.0.2)
imputeTS 3.2 2021-01-16 [1] CRAN (R 4.0.2)
jsonlite 1.7.2 2020-12-09 [1] CRAN (R 4.0.2)
KernSmooth 2.23-18 2020-10-29 [1] CRAN (R 4.0.5)
labeling 0.4.2 2020-10-20 [1] CRAN (R 4.0.2)
lattice 0.20-41 2020-04-02 [1] CRAN (R 4.0.5)
leaps 3.1 2020-01-16 [1] CRAN (R 4.0.2)
lifecycle 1.0.0 2021-02-15 [1] CRAN (R 4.0.2)
lmtest 0.9-38 2020-09-09 [1] CRAN (R 4.0.2)
lubridate * 1.7.10 2021-02-26 [1] CRAN (R 4.0.2)
magrittr 2.0.1 2020-11-17 [1] CRAN (R 4.0.2)
memoise 2.0.0 2021-01-26 [1] CRAN (R 4.0.2)
munsell 0.5.0 2018-06-12 [1] CRAN (R 4.0.2)
nlme 3.1-152 2021-02-04 [1] CRAN (R 4.0.5)
nnet 7.3-15 2021-01-24 [1] CRAN (R 4.0.5)
openxlsx 4.2.3 2020-10-27 [1] CRAN (R 4.0.2)
pillar 1.6.0 2021-04-13 [1] CRAN (R 4.0.5)
pkgbuild 1.2.0 2020-12-15 [1] CRAN (R 4.0.2)
pkgconfig 2.0.3 2019-09-22 [1] CRAN (R 4.0.2)
pkgload 1.2.1 2021-04-06 [1] CRAN (R 4.0.2)
prettyunits 1.1.1 2020-01-24 [1] CRAN (R 4.0.2)
processx 3.5.1 2021-04-04 [1] CRAN (R 4.0.2)
ps 1.6.0 2021-02-28 [1] CRAN (R 4.0.2)
purrr 0.3.4 2020-04-17 [1] CRAN (R 4.0.2)
quadprog 1.5-8 2019-11-20 [1] CRAN (R 4.0.2)
quantmod 0.4.18 2020-12-09 [1] CRAN (R 4.0.2)
R6 2.5.0 2020-10-28 [1] CRAN (R 4.0.2)
randtests 1.0 2014-11-17 [1] CRAN (R 4.0.2)
Rcpp 1.0.6 2021-01-15 [1] CRAN (R 4.0.2)
readxl 1.3.1 2019-03-13 [1] CRAN (R 4.0.2)
remotes 2.3.0 2021-04-01 [1] CRAN (R 4.0.2)
rio 0.5.26 2021-03-01 [1] CRAN (R 4.0.2)
RiverLoad * 1.0.2 2019-12-10 [1] CRAN (R 4.0.1)
rlang 0.4.10 2020-12-30 [1] CRAN (R 4.0.2)
rprojroot 2.0.2 2020-11-15 [1] CRAN (R 4.0.2)
scales 1.1.1 2020-05-11 [1] CRAN (R 4.0.2)
sessioninfo 1.1.1 2018-11-05 [1] CRAN (R 4.0.2)
smwrBase * 1.1.5 2021-04-13 [1] Github (USGS-R/smwrBase@2478663)
smwrData * 1.1.2 2021-04-13 [1] Github (USGS-R/smwrData@c0a68c3)
smwrGraphs * 1.1.4.9000 2021-04-13 [1] Github (USGS-R/smwrGraphs@f3debe7)
sp 1.4-5 2021-01-10 [1] CRAN (R 4.0.2)
stinepack 1.4 2018-07-30 [1] CRAN (R 4.0.2)
stringi 1.5.3 2020-09-09 [1] CRAN (R 4.0.2)
testthat 3.0.2 2021-02-14 [1] CRAN (R 4.0.2)
tibble 3.1.0 2021-02-25 [1] CRAN (R 4.0.2)
tidyr * 1.1.3 2021-03-03 [1] CRAN (R 4.0.2)
tidyselect 1.1.0 2020-05-11 [1] CRAN (R 4.0.2)
timeDate 3043.102 2018-02-21 [1] CRAN (R 4.0.2)
tseries 0.10-48 2020-12-04 [1] CRAN (R 4.0.2)
TTR 0.24.2 2020-09-01 [1] CRAN (R 4.0.2)
urca 1.3-0 2016-09-06 [1] CRAN (R 4.0.2)
usethis 2.0.1 2021-02-10 [1] CRAN (R 4.0.2)
utf8 1.2.1 2021-03-12 [1] CRAN (R 4.0.2)
vctrs 0.3.7 2021-03-29 [1] CRAN (R 4.0.2)
withr 2.4.1 2021-01-26 [1] CRAN (R 4.0.2)
xml2 1.3.2 2020-04-23 [1] CRAN (R 4.0.2)
xts 0.12.1 2020-09-09 [1] CRAN (R 4.0.2)
zip 2.1.1 2020-08-27 [1] CRAN (R 4.0.2)
zoo 1.8-9 2021-03-09 [1] CRAN (R 4.0.2)

[1] /Library/Frameworks/R.framework/Versions/4.0/Resources/library

@wdwatkins

Ah, yeah - I think there's some additional work that needs to happen for Macs. @wdwatkins or @aappling-usgs ...do either of you remember special installation instructions for Mac users?

I don't remember, sorry.

@Kellyb90

remotes::install_github("USGS-R/smwrStats", force = TRUE) worked fine for me on my Mac (I skipped all package updates). @Kellyb90 Can you post your install command and the full output? I wonder if there is another error happening that would be more descriptive.

@wdwatkins

@wdwatkins it didn't work but here is the full output:

remotes::install_github("USGS-R/smwrStats", force = TRUE)
Downloading GitHub repo USGS-R/smwrStats@HEAD
These packages have more recent versions available.
It is recommended to update all of them.
Which would you like to update?

1: All
2: CRAN packages only
3: None
4: RcppArmad... (0.10.2.2.0 -> 0.10.4.0.0) [CRAN]

Enter one or more numbers, or an empty line to skip updates: 3
✓ checking for file ‘/private/var/folders/dn/132b2sc97dv09dhw6_d4_4f00000gn/T/Rtmpmhcxz6/remotes104163e425abd/USGS-R-smwrStats-2e02eb7/DESCRIPTION’ ...
─ preparing ‘smwrStats’:
✓ checking DESCRIPTION meta-information ...
─ cleaning src
─ checking for LF line-endings in source and make files and shell scripts (335ms)
─ checking for empty or unneeded directories
─ building ‘smwrStats_0.7.6.tar.gz’

installing source package ‘smwrStats’ ...
** using staged installation
** libs
gfortran -mmacosx-version-min=10.13 -fno-optimize-sibling-calls -fPIC -Wall -g -O2 -c d_logam.f -o d_logam.o
make: gfortran: No such file or directory
make: *** [d_logam.o] Error 1
ERROR: compilation failed for package ‘smwrStats’
removing ‘/Library/Frameworks/R.framework/Versions/4.0/Resources/library/smwrStats’
restoring previous ‘/Library/Frameworks/R.framework/Versions/4.0/Resources/library/smwrStats’
Warning message:
In i.p(...) :
installation of package ‘/var/folders/dn/132b2sc97dv09dhw6_d4_4f00000gn/T//Rtmpmhcxz6/file1041676534e39/smwrStats_0.7.6.tar.gz’ had non-zero exit status

make: gfortran: No such file or directory

Looks like you need to install gfortran to be able to build the package, or specify the path to it if it's already installed. I do recall messing with this some years ago and getting it to work, but not sure where I would have put the instructions...

Do you use homebrew, or otherwise know if you have gfortran?

@wdwatkins

@wdwatkins I don't believe I have either. I am relatively new to R so I don't think I would of had a reason to install either of those. Can I download it for free somewhere?

Yes, gfortran is an open-source fortran compiler, it generally comes with the gcc set of compilers. Homebrew is a pretty popular package manager for Macs: https://brew.sh/. There is a terminal command you can copy and paste there to install brew, which you can then use to install gcc with brew install gcc in the terminal.

I forgot I tried to set this up once. You all should try and let me know if it works:

options(repos = c(
  ldeciccousgs = 'https://ldecicco-usgs.r-universe.dev',
  CRAN = 'https://cloud.r-project.org'))

# Install some packages
install.packages('rloadest')

I think it has a Mac binary which might solve these problems.

I forgot I tried to set this up once. You all should try and let me know if it works:
options(repos = c(
  ldeciccousgs = 'https://ldecicco-usgs.r-universe.dev',
  CRAN = 'https://cloud.r-project.org'))

# Install some packages
install.packages('rloadest')
I think it has a Mac binary which might solve these problems.

Thanks. It worked on my windows pc.

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rloadest won't fully install on mac #37

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rloadest won't fully install on mac #37

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ldecicco-USGS commented on Apr 14, 2021

Kellyb90 commented on Apr 14, 2021

ldecicco-USGS commented on Apr 14, 2021

aappling-usgs commented on Apr 14, 2021

wdwatkins commented on Apr 14, 2021

Kellyb90 commented on Apr 14, 2021

wdwatkins commented on Apr 14, 2021

Kellyb90 commented on Apr 14, 2021

wdwatkins commented on Apr 15, 2021

ldecicco-USGS commented on Feb 3, 2022

sisik1967 commented on Nov 18, 2024

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