Fix the concat --merge hang, and close the gap that hid it - #14

Merged

Claptar merged 16 commits into

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feat/performance-testing

Sep 24, 2026

Commits on Sep 21, 2026

Make the container image usable from Nextflow

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ff55700
Release 0.5.1

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dcd4d24
Size streaming reads for the filesystem, not the source chunk

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4859445
Make XDG_CACHE_HOME actually writable at runtime

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9a77450
Merge pull request #12 from cellgeni/feat/nextflow-compatible-image
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48fcc60

Commits on Sep 23, 2026

Make concat --merge finish: read each var column once, not once per variable

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1db401f
Add complexity guards, and fix the two cost defects they found

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ea81d6e
Add the comparative benchmark, run and published on every tag

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20a570f
Replace the estimated benchmark runtimes with measured ones

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3d597a6
Guard every remaining command, and fix the quadratic split found doing it

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75e056b
Benchmark the remaining commands, and document the three invariants

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797bf60
Make the benchmarks page reachable, and survive being republished

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ab7de2c
Merge remote-tracking branch 'origin/main' into investigate/concat-merge-hang
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fdc74c9
Restore the blank line before the 0.5.1 heading

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7c38c41
Measure peak RSS from a shim, so it is the child's own and not the runner's

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4db7d33
Size string reads from the real element width, not an assumed 64 bytes

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e8c24fb