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@genome

The McDonnell Genome Institute

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  1. gms gms Public archive

    The Genome Modeling System installer

    Perl 78 23

  2. bam-readcount bam-readcount Public

    Count bases in BAM/CRAM files

    CMake 326 99

  3. sciclone sciclone Public

    An R package for inferring the subclonal architecture of tumors

    R 124 56

  4. analysis-workflows analysis-workflows Public

    Open workflow definitions for genomic analysis from MGI at WUSM.

    Common Workflow Language 107 55

  5. genome genome Public

    Core modules used by the GMS

    Perl 71 57

  6. bfx-workshop bfx-workshop Public

    A course on genomics and bioinformatics from WashU

    HTML 89 26

Repositories

Showing 10 of 172 repositories
  • bfx-workshop Public

    A course on genomics and bioinformatics from WashU

    genome/bfx-workshop's past year of commit activity
    HTML 89 26 0 0 Updated Sep 28, 2026
  • genome Public

    Core modules used by the GMS

    genome/genome's past year of commit activity
    Perl 71 LGPL-3.0 57 9 0 Updated Aug 13, 2026
  • bam-readcount Public

    Count bases in BAM/CRAM files

    genome/bam-readcount's past year of commit activity
    CMake 326 MIT 99 48 1 Updated Jul 10, 2026
  • docker-depth-filter Public
    genome/docker-depth-filter's past year of commit activity
    Python 0 0 0 1 Updated Jun 1, 2026
  • bmm Public

    R package that uses a variational Bayesian approach to fitting a mixture of Beta distributions

    genome/bmm's past year of commit activity
    R 4 9 2 0 Updated Mar 15, 2026
  • sciclone Public

    An R package for inferring the subclonal architecture of tumors

    genome/sciclone's past year of commit activity
    R 124 56 4 1 Updated Mar 15, 2026
  • analysis-workflows Public

    Open workflow definitions for genomic analysis from MGI at WUSM.

    genome/analysis-workflows's past year of commit activity
    Common Workflow Language 107 MIT 55 74 15 Updated Jun 23, 2025
  • docker-bam_readcount_helper-cwl Public
    genome/docker-bam_readcount_helper-cwl's past year of commit activity
    Python 3 9 2 1 Updated Mar 10, 2025
  • docker-bam-readcount-cwl Public
    genome/docker-bam-readcount-cwl's past year of commit activity
    0 1 0 0 Updated Mar 10, 2025
  • docker-bam-readcount Public

    Docker containerization for "bam-readcount"

    genome/docker-bam-readcount's past year of commit activity
    Dockerfile 0 5 0 1 Updated Mar 10, 2025
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