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morphic-bio.github.io
morphic-bio.github.io PublicBasic repository with documentation, useful information and links related to the MorPHiC project
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- Chromap-suite Public
Open-source chromatin-accessibility platform: Chromap + libMACS3 (byte-identical narrow peaks) + libchromap callable library + MCP server. Composes with STAR Suite for end-to-end multiomic (RNA + ATAC) single-binary processing.
- rapidglm Public
RapidGLM: fast, portable generalized linear models and resampling tests for count data (C++17, MIT), with DESeq2-procedure and SCEPTRE-method applications
- STAR-suite Public
- rapidmacs Public
RapidMACS: MACS3-identical narrow peak calling for ATAC-seq, ChIP-seq and CUT&RUN, 3.5-51x faster. Publication artifact for the Bioinformatics Applications Note.
- STAR-suite-paper Public archive
Moved: the STAR Suite manuscript's benchmark scripts are at morphic-bio/STAR-suite-benchmarks
- STAR-suite-benchmarks Public
Benchmark scripts behind the STAR Suite 1.9.5 manuscript (drivers, checkers, concordance analyses)
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